dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00004
Location and strand information: 3636 - 7262 (+)
Family: 8.A.59.4.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00005
Location and strand information: 7262 - 8464 (+)
Family: null
Protein type: null
Protein description: Purine-binding protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00006
Location and strand information: 8595 - 10226 (+)
Family: GH43_4|GH43
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 4.5547
Protein molecular weight: 60600.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00007
Location and strand information: 10325 - 10570 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00008
Location and strand information: 11011 - 14034 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00009
Location and strand information: 14060 - 15013 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00010
Location and strand information: 15032 - 15901 (+)
Family: 3.A.1.1.39
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00011
Location and strand information: 15935 - 17998 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00012
Location and strand information: 17991 - 20339 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00013
Location and strand information: 20332 - 21384 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00014
Location and strand information: 21353 - 22357 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00015
Location and strand information: 22660 - 24102 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00016
Location and strand information: 24511 - 25467 (+)
Family: CBM42|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.7029
Protein molecular weight: 37079.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00017
Location and strand information: 25479 - 26984 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.1206
Protein molecular weight: 57233.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00018
Location and strand information: 27003 - 27245 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00019
Location and strand information: 27350 - 29335 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.1326
Protein molecular weight: 74901.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00020
Location and strand information: 29801 - 30730 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00021
Location and strand information: 30827 - 33907 (-)
Family: GH43_4|GH43|CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8286
Protein molecular weight: 111850.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001831_1|CGC1
Gene ID: MGYG000001831_00022
Location and strand information: 34227 - 36422 (+)
Family: CBM42|GH43|GH43_29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6899
Protein molecular weight: 79735.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001831_00006	GH43_e32
MGYG000001831_00016	GH43_e158\|CBM42_e13\|3.2.1.-	xylan
MGYG000001831_00017	GH51_e14\|3.2.1.55	arabinan
MGYG000001831_00019	GH127_e6
MGYG000001831_00021	GH43_e54\|CBM13_e83\|3.2.1.99	arabinan
MGYG000001831_00022	GH43_e167\|CBM42_e14\|3.2.1.55\|3.2.1.37	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan|arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001831_00004	hypothetical protein	TC	3636	7262	+	8.A.59.4.1
MGYG000001831_00005	Purine-binding protein	null	7262	8464	+	Bmp
MGYG000001831_00006	Extracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	8595	10226	+	GH43_4\| GH43
MGYG000001831_00007	hypothetical protein	null	10325	10570	+	No domain
MGYG000001831_00008	hypothetical protein	STP	11011	14034	+	SBP_bac_1
MGYG000001831_00009	L-arabinose transport system permease protein AraP	TC	14060	15013	+	3.A.1.1.34
MGYG000001831_00010	Trehalose transport system permease protein SugB	TC	15032	15901	+	3.A.1.1.39
MGYG000001831_00011	hypothetical protein	null	15935	17998	+	NHL\| Yip1
MGYG000001831_00012	hypothetical protein	null	17991	20339	+	DUF5696
MGYG000001831_00013	hypothetical protein	TC	20332	21384	+	3.A.1.1.11
MGYG000001831_00014	L-arabinose transport system permease protein AraQ	TC	21353	22357	+	3.A.1.1.48
MGYG000001831_00015	hypothetical protein	STP	22660	24102	+	SBP_bac_1
MGYG000001831_00016	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	24511	25467	+	CBM42\| GH43\| GH43_26
MGYG000001831_00017	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	25479	26984	+	GH51
MGYG000001831_00018	hypothetical protein	null	27003	27245	+	DUF6171
MGYG000001831_00019	Non-reducing end beta-L-arabinofuranosidase	CAZyme	27350	29335	-	GH127
MGYG000001831_00020	hypothetical protein	TF	29801	30730	+	HTH_5
MGYG000001831_00021	hypothetical protein	CAZyme	30827	33907	-	GH43_4\| GH43\| CBM13
MGYG000001831_00022	hypothetical protein	CAZyme	34227	36422	+	CBM42\| GH43\| GH43_29
Protein ID	Protein Name	Type	Start	End	Strand	Signature